The next Helmholtz Hacky Hour will take place on Wednesday, December 9, 2020 from 2PM to 3PM! Topic: Sustainable Programming! more...

Commit 840da797 authored by Florian Centler's avatar Florian Centler

Update README.md

parent 26516bb2
......@@ -162,7 +162,7 @@ Inside the `$path/` folder, the following sub-folders will be created:
### External annotation with Diamond and MEGAN6
To finalize our analysis process, the annotation is performed externally. This allows for switching to a more powerfull machine as Diamond needs a lot of computational power to generate an NCBI-database based mapping file per sample.
In case no suitable computational facilities are availble, consider using computationally less demanding tools such as [Prokka](https://github.com/tseemann/prokka) for annotation.
In case no suitable computational facilities are availble, consider using computationally less demanding tools such as [Prokka](https://github.com/tseemann/prokka) for functional annotation.
The first step for annotation is to generate an `nr.dmnd` file based on `nr.gz`, downloaded from NCBI, with Diamond. This step must be performed only at the first time:
......
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment