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Commit 1dc84383 authored by Florian Centler's avatar Florian Centler
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parent ddbb8d99
# µbialSim
This is µbialSim (pronounced *microbialsim*), a dynamic Flux-Balance-Analysis-based simulator for complex microbial communities. Batch and chemostat operation can be simulated. Simulation results detail the temporal evolution of compound concentrations and biomass concentrations for each microbial species in the bioreactor, and internal flux distributions. For low diversity microbiomes Matlab's ODE solvers can be used, while for more complex communities an augmented forward Euler method is implemented in µbialSim.
......@@ -109,3 +111,4 @@ This project is licensed under the GNU General Public License v3.0 - see the [LI
## Acknowledgments
* This code was made possible by funding from the German Federal Ministry of Education and Research to Florian Centler (e:Bio project McBiogas, FKZ 031A317)
* Logo design by Rodrigo A. Colpo, UFZ - Helmholtz Centre for Environmental Research, Leipzig, Germany
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