From 75490d5c59c6182b306ba0fb675091f06a6a72ee Mon Sep 17 00:00:00 2001
From: Martin Lange <martin.lange@ufz.de>
Date: Mon, 8 Feb 2021 02:12:09 +0100
Subject: [PATCH] text for sections Design and Initialization

---
 README.md | 14 ++++++++++++++
 1 file changed, 14 insertions(+)

diff --git a/README.md b/README.md
index 94fcb4d..51a92ac 100644
--- a/README.md
+++ b/README.md
@@ -2,6 +2,10 @@
 
 This is an example project to demonstrate Literate Programming to create [NetLogo](https://ccl.northwestern.edu/netlogo/) models from ODD+C protocols using [Yarner](https://github.com/mlange-42/yarner).
 
+## How to use this project
+
+TODO
+
 ## Rabies model - ODD protocol
 
 ### Purpose
@@ -75,8 +79,16 @@ end
 
 ### Design concepts
 
+Fox families as the only model entities live on a rectangular grid of habitat patches. Patches can be empty or occupied.
+
+Reproduction and juvenile dispersal are subsumed under a single process [Dispersal](#dispersal). Once a year, a certain number of female offspring disperses from each fox family. Time and target location of dispersal are stochastic. Dispersal is restricted by a maximum dispersal radius.
+
+Fox families can become infected with Rabies. Rabies can be transmitted to the 8 immediate neighbouring families. Infection is stochastic and infection probability depends on the number of infected neighbours.
+
 ### Initialization
 
+The model is initialized by populating each habitat patch with a `S`usceptible fox family. One randomly selected family is infected.
+
 ```netlogo
 ;- Setup
 to setup
@@ -97,6 +109,8 @@ end
 
 ### Input data
 
+The model uses no input data.
+
 ### Submodels
 
 ```netlogo
-- 
GitLab