From bb9ba9b2b731e177dd42cde898d072d66e660592 Mon Sep 17 00:00:00 2001
From: Peter Luenenschloss <peter.luenenschloss@ufz.de>
Date: Thu, 22 Apr 2021 14:21:02 +0200
Subject: [PATCH] everything up and running again
---
saqc/funcs/constants.py | 2 +-
saqc/lib/tools.py | 5 ++---
2 files changed, 3 insertions(+), 4 deletions(-)
diff --git a/saqc/funcs/constants.py b/saqc/funcs/constants.py
index d93fb349d..d4811092d 100644
--- a/saqc/funcs/constants.py
+++ b/saqc/funcs/constants.py
@@ -130,7 +130,6 @@ def flagByVariance(
Flags values may have changed, relatively to the flags input.
"""
dataseries = data[field]
-
delta = getFreqDelta(dataseries.index)
if not delta:
raise IndexError("Timeseries irregularly sampled!")
@@ -142,6 +141,7 @@ def flagByVariance(
max_consec_missing = np.inf
min_periods = int(np.ceil(pd.Timedelta(window) / pd.Timedelta(delta)))
+ window = pd.Timedelta(window)
to_set = statPass(dataseries, lambda x: varQC(x, max_missing, max_consec_missing),
window, thresh, min_periods=min_periods, comparator='<')
diff --git a/saqc/lib/tools.py b/saqc/lib/tools.py
index 3b78b46c9..5ac575ebf 100644
--- a/saqc/lib/tools.py
+++ b/saqc/lib/tools.py
@@ -587,9 +587,9 @@ def getAttrOrApply(in_obj, apply_obj, attr_access='__name__', attr_or='apply'):
def statPass(datcol: pd.Series,
stat: Callable[[np.array, pd.Series], float],
- wnsz: FreqString,
+ wnsz: pd.Timedelta,
thresh: PositiveFloat,
- sub_wnsz: FreqString = None,
+ sub_wnsz: pd.Timedelta = None,
sub_thresh: PositiveFloat = None,
min_periods: PositiveInt = None,
comparator: Literal['>', '>=', '==', '<=', '<'] = '<'):
@@ -618,7 +618,6 @@ def statPass(datcol: pd.Series,
exceeds = exceeding_sub & exceeds
to_set = pd.Series(False, index=exceeds.index)
-
for g in exceeds.groupby(by=exceeds.values):
if g[0]:
to_set[g[1].index[0] - wnsz:g[1].index[-1]] = True
--
GitLab