Commit b63e6634 authored by David Schäfer's avatar David Schäfer
Browse files

restructered manual flags

parent 9c9c73eb
......@@ -65,7 +65,7 @@ rule merge:
rule calc:
input: "{PATH}/{logger_id}_level1.parquet",
output: "{PATH}/{logger_id}_saqc.parquet"
shell: "python --infile {input} --outfile {output} --configfile config/saqc-proc-{wildcards.logger_id}.csv --manfile manual/saqc-flags-{wildcards.logger_id}.csv"
shell: "python --infile {input} --outfile {output} --configfile config/saqc-proc-{wildcards.logger_id}.csv"
rule loadQS:
params: "{logger_id}"
......@@ -90,5 +90,3 @@ onsuccess:
shell("cat {log} | python pipetools/ --sender --recipient --subject 'CRNS Pipeline: FAILED' --stdin")
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment