diff --git a/R/helper.R b/R/helper.R index cec5ba451f55a7a7367e85fb53aba179ce0ad31f..bdfb9f137fd3b658d2007a2b6c20d38513f6e388 100644 --- a/R/helper.R +++ b/R/helper.R @@ -113,3 +113,8 @@ remove_tail <- function(f, pattern){ } return(f) } + +lwr <- function(df){ + names(df) <- tolower(names(df)) + return(df) +} diff --git a/R/run_swat_verify.R b/R/run_swat_verify.R index 120042ab06cdc60d5d252e45ed80af6b6f2c4833..ec265e271a8c2adfba4f068c4f0dfd58c7be344a 100644 --- a/R/run_swat_verify.R +++ b/R/run_swat_verify.R @@ -70,26 +70,27 @@ run_swat_verification <- function(project_path, outputs = c('wb', 'mgt', 'plt'), } else if(nchar(msg$stderr) == 0) { model_output <- list() if ('plt' %in% outputs) { - model_output$hru_pw_day <- read_tbl('hru_pw_day.txt', run_path, 3) + model_output$hru_pw_day <- read_tbl('hru_pw_day.txt', run_path, 3) %>% lwr } if ('wb' %in% outputs) { - model_output$basin_wb_day <- read_tbl('basin_wb_day.txt', run_path, 3) - model_output$basin_pw_day <- read_tbl('basin_pw_day.txt', run_path, 3) - model_output$hru_wb_aa <- read_tbl('hru_wb_aa.txt', run_path, 3) + model_output$basin_wb_day <- read_tbl('basin_wb_day.txt', run_path, 3) %>% lwr + model_output$basin_pw_day <- read_tbl('basin_pw_day.txt', run_path, 3) %>% lwr + model_output$hru_wb_aa <- read_tbl('hru_wb_aa.txt', run_path, 3) %>% lwr tryCatch({ - model_output$recall_yr <- read_tbl('recall_yr.txt', run_path, 3) + model_output$recall_yr <- read_tbl('recall_yr.txt', run_path, 3) %>% lwr }, error = function(e) { model_output$recall_yr <- NULL }) } if ('mgt' %in% outputs) { - model_output$mgt_out <- read_mgt(run_path) - model_output$mgt_sch <- read_sch(run_path) + model_output$mgt_out <- read_mgt(run_path) %>% lwr + model_output$mgt_sch <- read_sch(run_path) %>% lwr - hru_data <- read_tbl('hru-data.hru', run_path, 2) - landuse_lum <- read_tbl('landuse.lum', run_path, 2) - model_output$lum_mgt <- left_join(hru_data, landuse_lum, + hru_data <- read_tbl('hru-data.hru', run_path, 2) %>% lwr + landuse_lum <- read_tbl('landuse.lum', run_path, 2) %>% lwr + model_output$lum_mgt <- left_join(hru_data, + landuse_lum, by = c("lu_mgt" = 'name')) %>% distinct() %>% select(id, topo, hydro, soil, lu_mgt, plnt_com, mgt, tile) diff --git a/inst/CITATION b/inst/CITATION new file mode 100644 index 0000000000000000000000000000000000000000..452509cfd75a48bcf4b825559cdc0fe8840c2f5d --- /dev/null +++ b/inst/CITATION @@ -0,0 +1,13 @@ +citHeader("To cite SWATdoctR in publications use:") + +citEntry( + entry = "Manual", + title = 'SWATdoctR: SWAT+ model setup verification tool', + author = 'Christoph Schürz and Svajunas Plunge', + year = '2023', + note = 'R package', + url = 'https://git.ufz.de/schuerz/swatdoctr', + textVersion = paste('Schürz, Christoph and Plunge, Svajunas (2023),', + 'R package for SWAT+ model setup verification.', + 'URL https://git.ufz.de/schuerz/swatdoctr') +)