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Created with Raphaël 2.2.022Jul26Apr6530Mar23810Feb327Jan181315Dec330Nov24234219Oct17Sep12Aug11328Jul30Jun2926252322161514131110120May626Apr13126529Mar2826232120191128Feb4121Jan1814121115Dec149827Nov231912Oct9728Sep262422212010731Aug29191817113131Jul30282723209765432126Jun212019181615141198543231May2827262423222019181511987654128AprExtend the sample helper to support ad-hoc actions like externally modifying the world state.sampling-with-a…sampling-with-adhoc-actionAdd initialiser to produce new insects at constant rate.population-dyna…population-dynamicsUse the ID of the insects to track whether they died and must be removed from the simulation.Add population observer to prepare for explicit population dynamics.Properly initialize the NextId generator will the last ID used during model initialization.mainmainMake use of multiple raster layers to have different distributions for different plant species.multi-species-r…multi-species-rasterPrepare raster library for multiple layers.Garbage collect flower contaminators before writing world state to disk.restore-staterestore-stateWIP: Move the flower_contaminators into each FlowerPatch to be able to trace through save/restore cycles.WIP: Move DES events from Model to World so that the time evolution can be resumed.WIP: Move Model::visited_flowers into World to make it available for save/restore.Support restoring the world state by setting the RESTORE_PATH environment variable.Actually use Hashbrown in the measurements now that it is part of our dependencies.Fix missing save/restore of World::observers field.Only create initial node additions if tracing temporal network is actually enabled.Unbox the next ID generator as we cannot properly restore a boxed closure.Add flag to sampling effects experiment to load landscape file from canonical path.Add weights for EUNIS types based on French flower survey.Add a simple measurement for aggregate flower visitation rates.Use a slightly more robust code pattern for restoring boxed slices.Use a more redundant format for the node replacements that is however not affected by the lack of event ordering between subworlds.Extend the temporal network binary format to include node addition and removal.Bump Hashbrown dependency to 0.12 and make it available to the measurements.Extend temporal network to track the node set in addition to the edges.Fix left over text fragment from refactoring.Add backup slides on niche overlap.Another talk on (the lack of) modelling progress.Add experiment 'contact_network.rs'Bump depdenencies and toolchain version.Add specific flowering periods to be able to investigate directionality in the transmisson networks.flowering-periodsflowering-periodsUpdate paper draft to align with update data set.update-diet-bre…update-diet-breadth-resultsUpdate results of diet breadth experiment after fixing K-D tree look-up.Commit survey results for investigation into niche overlap.niche-overlap-r…niche-overlap-resultsAdd new reference on comparing transmission pathways.Revert microarch bump to Skylake as there are still Broadwell nodes in the system.Since the EVE renewal, we can target Skylake instead of Broadwell as the oldest relevant microarchitecture.Bump locked dependency and compiler version.Use the full precision when storing temporal network node identifiers as some scenarios require it.Make tracing the temporal network optional as it has a significant computational cost.Use denser flat maps instead of hash tables for the inner level of the flower contaminators.