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version 3.0.0

Sebastian Henz requested to merge develop into master

description

  • closes #24 (closed): Include the plot axis concentrations in the curves data.frame.
  • closes #27 (closed): Explain the mixture model a bit better. Will link to the paper once it is published.
  • closes #36 (closed): Rename effect to survival and ec to lc.
  • closes #37 (closed): Rename predict_mixture() to multi_tox().
  • closes #38 (closed): Include R 3.5.1 in gitlab-ci.
  • closes #39 (closed): Change proportion_ca argument to proportion_sa. It now specifies the proportion of stress addition in the calculation of toxicant stress. So just calculate 1 - proportion_ca to get the new value.
  • closes #40 (closed): Explicitly check R version 3.6.3 in gitlab-ci. This is for when the current rocker image moves to R 4.0.0.
  • closes #41 (closed): Fix a bug in plot_stress() when which = NULL.
  • closes #43 (closed): Don't let gitlab-ci run document() to increas the chance of catching mismatches between the roxygen comments and the .Rd files.
  • closes #45 (closed): Rename get_log_ticks() to log10_ticks() and export it.

system details

  • RStudio Version: 1.3.957
  • R Version: 3.6.3
  • OS Version: Windows 10 x64 (build 18363)

checklist

  • This merge introduces new features.
    • new features are documented
    • new features have tests
  • update documentation including examples (if necessary)
  • update and polish NEWS.md
  • update version in DESCRIPTION
  • update date in DESCRIPTION
  • no remaining TODO, FIXME, or debug prints anywhere in the source files
  • devtools::document()
  • devtools::check() without errors or warnings
Edited by Sebastian Henz

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